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Omics · study · 2026

Niche-driven plasticity of bipotent basal epithelial cells in the human ocular surface [scRNA-seq]

Listed in NCBI GEO

The human ocular surface comprises corneal and conjunctival epithelia separated by the limbus, a specialized niche that maintains corneal transparency through limbal stem and progenitor cells (LSCs).

Description

LSC loss or dysfunction causes limbal stem cell deficiency (LSCD), characterized by conjunctivalization, neovascularization, chronic inflammation, and corneal scarring, leading to severe visual impairmen. LSCD may result from injury, autoimmune disease or genetic disorders, yet current treatmens, including limbal transplantation and ex vivo–expanded epithelial grafts, are limited by donor availability and variable long term efficacy.

Until now, the limbus has been regarded as a static boundary enforcing lineage segregation between corneal and conjunctival epithelia. Here, we show that the human limbus instead harbors bipotent basal epithelial progenitors that are transcriptionally more similar to conjunctival than corneal basal cells and whose fate is directed by local niche cues. Keratinocyte growth factor (KGF) signaling through FGFR2 promotes corneal epithelial differentiation, whereas epidermal growth factor (EGF) maintains conjunctival identity.

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This niche dependent epithelial plasticity provides a mechanistic explanation for conjunctivalization in LSCD and identifies KGF–FGFR2 signaling as a potential therapeutic target for corneal epithelium restoration. Together, these findings redefine the limbus as a dynamic progenitor niche with broad implications for stem cell biology and regenerative medicine.

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From keywords
Life Sciences
Inferred from text
Disease 75% · Single-cell RNA sequencing 65%
Provenance · 1 source records, 10 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE31983611 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[disease].local:disease:diseaseenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[method].geo_series_type:othersource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[modality].local:modality:single-cell-rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (65%)
concepts[organism].NCBITaxon:9606source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title