Omics · study · 2026
Dual regulation of CXCR6+CD8+ T cells drives immune exhaustion in the progression of prostate cancer [PB-Cre; Pten knockout and WT]
Listed in NCBI GEO
Prostate cancer (PCa) is widely recognized as an immunologically "cold" malignancy, characterized by limited responsiveness to immune checkpoint blockade.
Description
To disclose the mechanisms underlying immune exclusion, we performed single-cell RNA sequencing (scRNA-seq) of tumor-infiltrating immune cells from patients with PCa and identified a previously unappreciated subset of CXCR6+CD8+ cytotoxic T lymphocytes (CXCR6+ CTLs).
Notably, the abundance of these cells was inversely correlated with Gleason Score (GS), indicating progressive depletion in advanced stages of PCa. Mechanistically, this depletion is modulated by dual converging pathways. On the one hand, reduced infiltration of M1-like macrophages in higher-grade tumors leads to diminished production of CXCL16, thereby impairing the recruitment of CXCR6⁺ CTLs; On the other hand, IL-10 derived from the tumor microenvironment, partly from M2-like macrophages, downregulates CXCR6 expression via the IL10–FOXO1–KLF2 transcriptional axis.
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SCENIC analysis and further identified KLF2 as a central transcriptional regulator governing CD8⁺ T cell fate, reinforcing its role in T cell dysfunction. Collectively, our findings delineate a multifaceted mechanism of T cell exclusion in advanced PCa and suggest that targeting the transcriptional axis to restore CXCR6⁺ CTL infiltration or sustain CXCR6 expression in CD8+ T cell, when combined with anti-PD1 therapy, may potentiate anti-tumor immunity and surmount resistance to immunotherapy in this disease.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE313nnn/GSE313701 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313701 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1381354 ncbi.nlm.nih.gov/bioproject/PRJNA1381354 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Cancer 75% · Disease 75% · RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 12 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE313701 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |