Omics · study · 2026
Truncated Gpr114-based ultrasound-hypersensitive gene circuit for controlled expression of therapeutics
Listed in NCBI GEO
Sonogenetics possesses significant potential for modulating cellular functions and behaviors.
Description
However, developing hypersensitive ultrasound (US)-responsive receptors presents a substantial challenge. Here, we utilized AlphaFold3 and molecular dynamics simulation technology to identify a hypersensitive Gpr114 protein variant (T-Gpr114) that can be activated by short-pulse US stimulation.
We then engineered sonogentic macrophages (MΦ) using T-Gpr114 and integrated with an engineered genetic circuit, enabling high-performance expression of the nuclear factor ID3 upon short-pulse US stimulation. In mice, sonogentic-MΦ suppressed tumor growth without causing obvious toxicity and outperformed their constitutively expressing counterparts. Single-cell RNA sequencing revealed that engineered sonogentic-MΦ exhibit enhanced phagocytosis and improved recruitment of CD8+ T cells compared to cells with constitutive ID3 expression.
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This T-Gpr114-based US-hypersensitive gene circuit can be extended to remotely control the activation of various cell types, thereby facilitating the programming of therapeutic cells and enhancing their suitability for clinical translation.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE311nnn/GSE311869 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE311869 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1371873 ncbi.nlm.nih.gov/bioproject/PRJNA1371873 ↗
project · from NCBI GEO
- PubMed 42686781 pubmed.ncbi.nlm.nih.gov/42686781 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Cancer 65% · RNA sequencing 75% · Sequencing 75% · Simulation 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 12 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE311869 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[method].local:method:simulation | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |