Omics · study · 2026
Striatal lesion induce the re-emergence and integration of transient LGE-class interneurons from local astrocytes
Listed in NCBI GEO
At the end of development, cortical and striatal progenitor domains converge to generate lateral ganglionic eminence (LGE)-class interneurons that differentiate into OB interneurons.
Description
Outside the periventricular niche, cortical and striatal astrocytes possess a widespread latent neurogenic potential, however the identity and integration capacity of their neuronal progeny are still unclear. Single-cell RNA sequencing analysis revealed that neuroblasts derived from striatal astrocytes after excitotoxic lesions or from striatal and cortical astrocytes after Notch pathway abrogation, also belong to LGE-class interneurons.
Interestingly, during development, neurons of this class transiently populate several brain regions, including the striatum. Despite their transient life, in the lesioned striatum these neuroblasts attain complex morphologies and receive excitatory inputs from cortical and thalamic neurons. Cortical and striatal astrocytes thus share with their periventricular siblings a commitment towards LGE-class interneurons, which include a new type of transient neuron that is widely distributed during development and can re-emerge on demand in adulthood.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE303nnn/GSE303816 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE303816 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1297719 ncbi.nlm.nih.gov/bioproject/PRJNA1297719 ↗
project · from NCBI GEO
- PubMed 42462713 pubmed.ncbi.nlm.nih.gov/42462713 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE303816 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |