Data · dataset · 2021
Data set III related to "Evolutionary assembly of cooperating cell types in a multi-compound chemical defense system"
Listed in CaltechDATA
We deploy single-cell RNA sequencing (10x) and tissue specific ultra-low input RNAseq methods to delineate the molecular evolution of a rove beetle gland.
Description
We deconstruct the molecular assembly of new cellular functions comprising a biosynthetic organ novelty and uncover how gland function was pieced together from ancestral molecular source material through the assembly of two novel secretory cell types, each of which synthesize distinct compound classes. --- Dalotia coriaria transcriptome and annotation
Links
Where it is published
- CaltechDATA record data.caltech.edu/records/5vd8b-sz113 ↗
landing page · from data caltech edu
- DOI doi.org/10.22002/d1.1914 ↗
DOI / persistent id · from data caltech edu
Catalogue records · 1
- InvenioRDM API data.caltech.edu/api/records/5vd8b-sz113 ↗
metadata API · from data caltech edu
Topics
- Stated by source
- cell types · evolution · rove beetles · scRNAseq
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
- Inferred from text
- Phylogeny and comparative analysis 79% · RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 20 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| CaltechDATA | 5vd8b-sz113 | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].anzsrc:field:310410 | enrichment · data caltech edu | taxonomy-embedding@1.0.0 | title+keywords+description (79%) |
| concepts[field].local:field:earth-environmental | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].local:field:engineering | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].local:field:humanities | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].local:field:social-science | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[modality].local:modality:rna-seq | enrichment · data caltech edu | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · data caltech edu | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · data caltech edu | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[topic].invenio_subject:data_caltech_edu:cell-types | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[topic].invenio_subject:data_caltech_edu:evolution | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[topic].invenio_subject:data_caltech_edu:rove-beetles | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[topic].invenio_subject:data_caltech_edu:scrnaseq | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| description | source · data caltech edu | connector:data_caltech_edu@1.0.0 | /metadata/description |
| license | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| publication_date | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| title | source · data caltech edu | connector:data_caltech_edu@1.0.0 | /metadata/title |
| updated_date | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| version_label | source · data caltech edu | connector:data_caltech_edu@1.0.0 |