Table · dataset · 2026
<i>De novo</i> trancriptomic analysis of gill tissue from Sevneband grouper (<i>Hyporthodus septemfasciatus</i>) following NNV infection
Listed in figshare
<p dir="ltr">This dataset contains processed transcriptome analysis results from gill tissues of juvenile seven-band grouper <i>(Hyporthodus septemfasciatus) </i>following nervous necrosis virus (NNV) infection.
Description
Samples consisted of PBS-injected control gill tissues (n = 3) and NNV-infected gill tissues (n = 3). Sequencing was performed on an Illumina NovaSeq 6000 platform using a paired-end 2 × 101 bp configuration, and libraries were prepared with the TruSeq Stranded Total RNA LT Sample Prep Kit (Gold).</p><p><br></p><p dir="ltr">The dataset includes unigene assembly files, ORF prediction outputs, functional annotation tables, expression profile matrices, DEG result tables, and analysis summary statistics.
Raw RNA-seq reads from the same project have been deposited in the European Nucleotide Archive (ENA) under study accession PRJEB115743.</p>
Links
Where it is published
- DOI doi.org/10.6084/m9.figshare.32880971.v3 ↗
DOI / persistent id · from figshare com
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from figshare com
Topics
- From keywords
- Aquaculture · Astronomy & Astrophysics · Chemistry · Computer Science & AI · Earth & Environmental Science · Economics & Finance · Engineering · Genomics · Genomics and transcriptomics · Humanities · Life Sciences · Medicine & Health · Ocean & Atmospheric Science · Social Science · Virology
- Inferred from text
- RNA sequencing 65% · Sequencing 75%
Provenance · 1 source records, 22 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| figshare | oai:figshare.com:article/32880971 | 4 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].anzsrc:field:300501 | mapping · figshare com | vocabulary-mapper@1.0.0 | keywords['Aquaculture'] |
| concepts[field].anzsrc:field:310204 | mapping · figshare com | vocabulary-mapper@1.0.0 | keywords['Genomics and transcriptomics'] |
| concepts[field].anzsrc:field:310509 | mapping · figshare com | vocabulary-mapper@1.0.0 | keywords['Genomics'] |
| concepts[field].anzsrc:field:310706 | mapping · figshare com | vocabulary-mapper@1.0.0 | keywords['Virology'] |
| concepts[field].local:field:astronomy | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:computer-science-ai | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:economics-finance | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:engineering | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:humanities | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:ocean-atmospheric | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:social-science | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[modality].local:modality:rna-seq | enrichment · figshare com | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:sequencing | enrichment · figshare com | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/description |
| license | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/rights |
| publication_date | source · figshare com | connector:figshare_com@1.0.0 | |
| title | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/title |