Omics · study · 2026
KMT9 reprograms the tumour immune microenvironment in prostate cancer [scRNA-Seq]
Listed in NCBI GEO
Prostate carcinoma is the most common malignancy in males and the second leading cause of cancer-related deaths in Western countries.
Description
Loss of the tumour suppressor PTEN, encoded by one of the most frequently deleted genes in human prostate cancer, is associated with a highly immunosuppressive tumour microenvironment (TME). In consequence, immunotherapies targeting prostate cancer typically show low clinical efficacy.
The immunosuppressive TME state is mediated in part by various cytokines and chemokines resulting in infiltration of heterogeneously differentiated myeloid cells including polymorphonuclear myeloid-derived suppressor cells (PMN-MDSCs). Here we show that the methyltransferase KMT9 regulates expression of immunosuppressive proteins such as PD-L1 and myeloid-attracting CXCR2 ligands in prostate tumours of Pten/Trp53 knockout (KO) mice.
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Accordingly, KMT9 ablation in Pten/Trp53 KO tumours results in chemokine downregulation and TME remodelling towards an immunoresponsive state characterised by an altered composition and spatial distribution of PMN-MDSCs and other immune cell populations. Importantly, combining KMT9 deficiency with CXCR2 inhibition blocks myeloid cell recruitment resulting in prostate tumour regression and extended mouse survival. Together, our findings uncover KMT9 as a TME regulator and pave the way for the development of novel immunotherapeutic approaches for the treatment of prostate cancer.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE253nnn/GSE253017 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE253017 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1063658 ncbi.nlm.nih.gov/bioproject/PRJNA1063658 ↗
project · from NCBI GEO
- PubMed 42760560 pubmed.ncbi.nlm.nih.gov/42760560 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Cancer 75% · Single-cell RNA sequencing 65%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE253017 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |