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Omics · study · 2026

Single-cell profiling of human liver and peripheral-blood γδ T cells according to HCMV serostatus

Listed in NCBI GEO

Description

This study generated single-cell transcriptomic and surface-protein datasets to examine the heterogeneity of human liver sinusoidal γδ T cells and their association with latent human cytomegalovirus infection. γδ T cells isolated from liver perfusates of healthy living donors were profiled using single-cell RNA sequencing with antibody-derived tags. The dataset includes Vγ9Vδ2 and non-Vγ9Vδ2 γδ T-cell populations from HCMV-seropositive and HCMV-seronegative donors and enables comparison of their transcriptional states, surface phenotypes, differentiation patterns, and TCR repertoires.

Paired peripheral-blood γδ T-cell samples were additionally profiled for comparison with liver-derived populations.eir diverse functions.

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From keywords
Life Sciences
Inferred from text
RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 11 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE30177112 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[method].geo_series_type:othersource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[modality].local:modality:rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[modality].local:modality:sequencingenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[modality].local:modality:single-cell-rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[organism].NCBITaxon:9606source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title