Omics · study · 2026
RBBP6 orchestrates diabetic endothelial dysfunction viadisrupting JUNB-centric chromatin topology
Listed in NCBI GEO
Diabetes mellitus, a chronic metabolic disease affecting over 536.6 million people globally, is closely associated with vascular endothelial dysfunction, an early hallmark of diabetic cardiovascular complications.
Description
This dysfunction is characterized by impaired endothelial nitric oxide synthase (eNOS) activity, reduced nitric oxide (NO) production, and diminished angiogenic capacity, ultimately contributing to tissue ischemia and complications such as diabetic nephropathy, coronary artery disease, and peripheral arterial disease.
These complications significantly increase morbidity and mortality in diabetic patients. Endothelial cells, which regulate vascular development and function, rely on the coordinated activity of cis-regulatory elements, including enhancers and promoters, which are influenced by the three-dimensional (3D) genome architecture and transcription factors (TFs) such as AP-1, ETS, and GATA families. However, the mechanisms by which these TFs mediate enhancer-promoter interactions and how these interactions are altered under diabetic conditions remain poorly understood.
Read the rest (2 more)
To address this, we employed multi-omics profiling to map the 3D genome architecture in endothelial cells under hyperglycemic conditions in both diabetic mice and human vein endothelial cells. Our findings identify the disruption of JUNB-centric genome topology as a key feature of hyperglycemic endothelial cells. Moreover, we demonstrate that RBBP6 mediates ubiquitin-dependent degradation of JUNB, leading to changes in enhancer-promoter interactions.
This study provides novel mechanistic insights into the chromatin 3D structural basis of endothelial dysfunction in diabetes and highlights the RBBP6-JUNB axis as a potential therapeutic target for preventing diabetic cardiovascular complications.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE291nnn/GSE291636 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE291636 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1234557 ncbi.nlm.nih.gov/bioproject/PRJNA1234557 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Genome binding/occupancy profiling by high throughput sequencing · Homo sapiens · Mus musculus · Other
- From keywords
- Life Sciences
- Inferred from text
- Disease 75%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE291636 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |