Omics · study · 2026
A habenula-enriched GPCR, GPR151, regulates behavioral sensitivity to inflammation
Listed in NCBI GEO
These are snRNA-seq data from one human habenula.
Description
We used these data to compare GPR151 and CHRM3 expression and Gpr151 and CHRNB4/CHAT expression from single nuclei in the human habenula to expression of these genes from a published mouse scRNA-seq dataset (Hashikawa, Y. et al. Transcriptional and Spatial Resolution of Cell Types in the Mammalian Habenula. Neuron 106, 743-758 e745 (2020)).
We also compared these data to those from Yalcinbas, E. A. et al. Transcriptomic Analysis of the Human Habenula in Schizophrenia. Am J Psychiatry 182, 991-1006 (2025).
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE348nnn/GSE348268 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE348268 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1533334 ncbi.nlm.nih.gov/bioproject/PRJNA1533334 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Single-cell RNA sequencing 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE348268 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |