Omics · study · 2026
Oncogenic KRAS promotes pancreatic ductal adenocarcinoma (PDAC) through post-transcriptionally regulated KRAS-induced granules (KGs) [RNA-seq]
Listed in NCBI GEO
Over 90% of pancreatic ductal adenocarcinoma (PDAC) tumors harbor mutations in KRAS which promote many hallmark characteristics of cancer.
Description
How a single driver mutation causes the malignant properties observed in PDAC is poorly understood. We discovered that oncogenic KRAS suppresses miRNA biogenesis and function, thus increasing the stability and translation efficiency of miRNA targets.
Defective miRNA function causes an accumulation of mRNA, and drives the localization of components of the mRNA degradation machinery into novel post-transcriptional condensates termed KRAS-induced granules (KGs). Mechanistically, we find that KG formation depends on the phosphorylation of Argonaute2 at tyrosine393 and requires EGFR, but not MEK or PI3K signaling. Using in vivo and in vitro models, we find that genetic ablation of KGs leads to decreased proliferation and migration, delayed tumorigenesis, and reduced tumor angiogenesis and innervation.
Read the rest (1 more)
Our findings reveal an essential and therapeutically targetable role for altered post-transcriptional regulation in PDAC tumorigenesis.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE239nnn/GSE239297 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE239297 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA998779 ncbi.nlm.nih.gov/bioproject/PRJNA998779 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Cancer 75% · RNA sequencing 65%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE239297 | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |