Omics · study · 2026
scRNA-seq of vascular endothelial cells from multiple mouse tissues and human limb muscle
Listed in NCBI GEO
In this study, we analyzed vascular endothelial cells (ECs) from multiple mouse tissues, liver, limb, and lung as well as from human limb muscle.
Description
We demonstrate that CD157-positive ECs exhibit a conserved transcriptional profile across tissues, including gene signatures associated with angiogenesis. By integrating mouse and human scRNA-seq datasets, we identified EC clusters in human tissue that display gene expression profiles similar to those of mouse CD157-positive ECs.
These cells were localized to the intima of large vessels and were found to express newly identified, specific marker genes.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE303nnn/GSE303731 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE303731 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1297175 ncbi.nlm.nih.gov/bioproject/PRJNA1297175 ↗
project · from NCBI GEO
- PubMed 42242216 pubmed.ncbi.nlm.nih.gov/42242216 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Single-cell RNA sequencing 65%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE303731 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |